STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_2995Protein of unknown function; DUF485. (103 aa)    
Predicted Functional Partners:
NH8B_2996
Cation/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.996
NH8B_3092
Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase.
 
  
 0.911
dnaQ-3
DNA polymerase III, epsilon subunit; K02342.
 
    0.860
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
    0.788
acs-3
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.775
NH8B_0214
propionyl-CoA synthetase; K01908.
  
  
 0.486
NH8B_0039
acetoacetyl-CoA synthase; K01907.
  
  
 0.463
NH8B_1762
AMP-dependent synthetase and ligase; K01895.
  
  
 0.463
NH8B_1995
acetoacetyl-CoA synthetase; K01907.
  
  
 0.463
acs
acetyl-CoA synthetase; K01895.
  
  
 0.463
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.