STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_3056Hypothetical protein. (69 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.784
NH8B_2654
Hypothetical protein.
   
    0.700
NH8B_0542
Phage tail protein I.
 
    0.664
NH8B_0199
YfaZ family protein.
  
    0.620
NH8B_2560
Outer membrane protein, OmpH-like; Belongs to the skp family.
  
 
 0.615
NH8B_1306
Transcriptional regulator, MerR family.
   
    0.607
NH8B_3060
Endonuclease/exonuclease/phosphatase.
  
  
 0.541
NH8B_0561
Phage baseplate assembly protein V.
 
     0.521
NH8B_0544
GPW/gp25 family protein.
 
    0.515
NH8B_0551
Phage tail sheath protein.
 
    0.476
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.