STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_3141Hypothetical protein. (182 aa)    
Predicted Functional Partners:
NH8B_3142
Hypothetical protein.
 
     0.952
NH8B_3143
Hypothetical protein.
 
     0.952
NH8B_3139
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
     0.951
NH8B_3140
Hypothetical protein.
 
     0.951
gspG-3
Type II secretion system protein G.
 
     0.931
gspF-3
Type II secretion system protein F.
 
     0.880
gspE-2
Type II secretion system protein E.
 
     0.854
gspG
Type II secretion system pseudopilin PulG.
 
     0.851
gspG-4
Type II secretion system protein G.
 
     0.847
gspG-2
Type II secretion system protein G.
 
     0.808
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.