STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_3205Protein of unknown function; DUF748. (1112 aa)    
Predicted Functional Partners:
NH8B_3875
Protein of unknown function; DUF490.
  
  
 0.864
NH8B_0197
Hypothetical protein.
  
     0.663
NH8B_0154
Hypothetical protein.
  
     0.589
NH8B_1155
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.581
NH8B_1026
GtrA family protein.
  
     0.580
NH8B_0751
Protein of unknown function; DUF1458.
  
    0.568
NH8B_0737
Dicarboxylate transport protein YdbH/DctA.
     
 0.546
NH8B_3000
PepSY-associated TM helix domain protein.
  
     0.511
NH8B_3204
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
 
     0.510
NH8B_2340
KrfA family protein.
  
     0.504
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.