STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_3545Acylneuraminate cytidylyltransferase; K00983. (230 aa)    
Predicted Functional Partners:
NH8B_3550
N-acetylneuraminic acid synthetase; K01654.
 
 
 0.973
NH8B_3546
Putative glycosyltransferase.
 
   
 0.972
capD-2
Polysaccharide biosynthesis protein CapD.
 
  
 0.964
NH8B_3544
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.928
NH8B_3548
GlcNAc-PI de-N-acetylase family protein.
 
     0.857
NH8B_3547
Acetyltransferase, GNAT family.
 
     0.841
NH8B_3549
methionyl-tRNA formyltransferase; K00604.
 
     0.799
NH8B_3325
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; K03270.
 
   0.713
NH8B_3538
dTDP-glucose 4,6-dehydratase; K01710; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.645
NH8B_3551
Hypothetical protein.
  
  
 0.631
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.