STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NH8B_3702Glycosyl transferase, group 1. (365 aa)    
Predicted Functional Partners:
NH8B_3701
Polysaccharide deacetylase.
  
 0.965
NH8B_3700
Glycosyl transferase, family 9.
  
 0.948
NH8B_3697
O-antigen polymerase.
 
  
 0.928
NH8B_3698
Glycosyl transferase, family 9.
 
  
 0.866
NH8B_3699
Glycosyl transferase, group 1.
 
    
0.855
NH8B_3696
Glycosyl transferase, family 9.
 
  
 0.852
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
 0.849
rfaQ
Lipopolysaccharide heptosyltransferase III.
 
  
 0.825
NH8B_3704
Glycosyl transferase, group 1.
 
    
0.790
NH8B_3694
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.709
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.