STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase; K01468. (412 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.998
hutH
Histidine ammonia-lyase; K01745.
 
  
 0.983
NH8B_3769
Formiminoglutamate deiminase; K05603.
 
 
 0.977
NH8B_3768
N-formylglutamate amidohydrolase; K01458.
 
  
 0.917
hutC
Histidine utilization repressor HutC.
 
  
 0.781
NH8B_1106
Alanine racemase domain protein; Belongs to the arginase family.
  
  
 0.573
NH8B_4082
Hypothetical protein.
       0.572
speB
Agmatinase; K01480; Belongs to the arginase family.
  
  
 0.561
speB-2
Agmatinase; K01480; Belongs to the arginase family.
  
  
 0.561
NH8B_2203
Permease for cytosine/purines uracil thiamine allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
  
    0.492
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.