STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40248.1Cellobiose phosphorylase; PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family. (805 aa)    
Predicted Functional Partners:
AGB40278.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Carbohydrate binding domain.
 
  
 0.936
AGB40282.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.922
AGB41598.1
Pullulanase, type I; PFAM: Domain of unknown function (DUF3372); Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.915
AGB41597.1
Pullulanase, type I; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.914
AGB40129.1
Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
    
 0.913
AGB40056.1
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; PFAM: Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
AGB40269.1
Beta-galactosidase; PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase.
    
 0.912
glgC
Glucose-1-phosphate adenylyltransferase/glucose-1-phosphate adenylyltransferase, GlgD subunit; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
  
  0.911
glgC-2
Glucose-1-phosphate adenylyltransferase/glucose-1-phosphate adenylyltransferase, GlgD subunit; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
  
  0.911
AGB41378.1
PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
     
 0.908
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.