STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40267.1Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component. (303 aa)    
Predicted Functional Partners:
AGB40268.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.964
AGB40098.1
ABC-type maltose transport systems, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.918
AGB40139.1
ATPase component of ABC-type sugar transporter; PFAM: ABC transporter; TOBE domain.
 
 
 0.910
AGB40096.1
Maltose-binding periplasmic protein; PFAM: Bacterial extracellular solute-binding protein.
 
 0.892
AGB40266.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.889
AGB40244.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.870
AGB41262.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.870
AGB41272.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.870
AGB41741.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.870
AGB41747.1
ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.870
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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