STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40276.1Beta-glucanase/beta-glucan synthetase; PFAM: Glycosyl hydrolases family 16. (353 aa)    
Predicted Functional Partners:
AGB40277.1
PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.825
AGB40278.1
PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Carbohydrate binding domain.
  
 0.815
AGB41264.1
Putative beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.631
AGB40282.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.585
AGB41654.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
   
 0.567
AGB40450.1
Glycosidase; PFAM: Bacterial Ig-like domain (group 2); Alpha amylase, catalytic domain; Domain of unknown function (DUF2223).
  
  
 0.527
AGB40273.1
Hypothetical protein.
 
     0.466
AGB41661.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43.
  
   
 0.417
AGB41660.1
Beta-xylosidase; PFAM: Glycosyl hydrolases family 43.
  
   
 0.416
AGB40275.1
Hypothetical protein.
       0.413
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.