STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40340.1Uncharacterized Fe-S center protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362). (369 aa)    
Predicted Functional Partners:
AGB42157.1
Hypothetical protein; PFAM: Domain of unknown function (DUF362).
 
    0.591
AGB40372.1
Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A.
  
  
 0.564
AGB40341.1
Conserved protein of DIM6/NTAB family; PFAM: Flavin reductase like domain.
 
     0.552
AGB40339.1
PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme.
       0.511
AGB41629.1
PFAM: NADPH-dependent FMN reductase.
 
     0.477
AGB40901.1
PFAM: Aldo/keto reductase family.
 
    0.463
AGB40338.1
PFAM: Nitroreductase family.
 
     0.417
AGB41592.1
PFAM: Conserved region in glutamate synthase.
  
     0.405
AGB40317.1
TIGR00268 family protein; PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein.
 
    0.400
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.