Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGB40236.1 | AGB40364.1 | Halha_0224 | Halha_0362 | Putative amino acid racemase; PFAM: Alanine racemase, N-terminal domain. | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | 0.900 |
| AGB40361.1 | AGB40362.1 | Halha_0359 | Halha_0360 | Hypothetical protein. | PFAM: Protein of unknown function (DUF523). | 0.746 |
| AGB40361.1 | AGB40363.1 | Halha_0359 | Halha_0361 | Hypothetical protein. | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.746 |
| AGB40361.1 | AGB40364.1 | Halha_0359 | Halha_0362 | Hypothetical protein. | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | 0.731 |
| AGB40361.1 | AGB40365.1 | Halha_0359 | Halha_0363 | Hypothetical protein. | PFAM: Thioredoxin. | 0.632 |
| AGB40362.1 | AGB40361.1 | Halha_0360 | Halha_0359 | PFAM: Protein of unknown function (DUF523). | Hypothetical protein. | 0.746 |
| AGB40362.1 | AGB40363.1 | Halha_0360 | Halha_0361 | PFAM: Protein of unknown function (DUF523). | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.774 |
| AGB40362.1 | AGB40364.1 | Halha_0360 | Halha_0362 | PFAM: Protein of unknown function (DUF523). | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | 0.765 |
| AGB40362.1 | AGB40365.1 | Halha_0360 | Halha_0363 | PFAM: Protein of unknown function (DUF523). | PFAM: Thioredoxin. | 0.654 |
| AGB40362.1 | ddl | Halha_0360 | Halha_1765 | PFAM: Protein of unknown function (DUF523). | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.615 |
| AGB40363.1 | AGB40361.1 | Halha_0361 | Halha_0359 | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Hypothetical protein. | 0.746 |
| AGB40363.1 | AGB40362.1 | Halha_0361 | Halha_0360 | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | PFAM: Protein of unknown function (DUF523). | 0.774 |
| AGB40363.1 | AGB40364.1 | Halha_0361 | Halha_0362 | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | 0.764 |
| AGB40363.1 | AGB40365.1 | Halha_0361 | Halha_0363 | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | PFAM: Thioredoxin. | 0.654 |
| AGB40364.1 | AGB40236.1 | Halha_0362 | Halha_0224 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | Putative amino acid racemase; PFAM: Alanine racemase, N-terminal domain. | 0.900 |
| AGB40364.1 | AGB40361.1 | Halha_0362 | Halha_0359 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | Hypothetical protein. | 0.731 |
| AGB40364.1 | AGB40362.1 | Halha_0362 | Halha_0360 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | PFAM: Protein of unknown function (DUF523). | 0.765 |
| AGB40364.1 | AGB40363.1 | Halha_0362 | Halha_0361 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | rRNA methylase, putative, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.764 |
| AGB40364.1 | AGB40365.1 | Halha_0362 | Halha_0363 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | PFAM: Thioredoxin. | 0.668 |
| AGB40364.1 | AGB40377.1 | Halha_0362 | Halha_0382 | D-amino acid aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction. | PFAM: Aminotransferase class I and II. | 0.920 |
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