STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40572.1Hypothetical protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229). (365 aa)    
Predicted Functional Partners:
AGB40573.1
PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative.
   
 0.996
AGB40571.1
Hypothetical protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229).
   
0.988
AGB40569.1
Hypothetical protein.
 
     0.814
AGB40570.1
PFAM: Bacillus/Clostridium GerA spore germination protein.
       0.746
AGB40568.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.
       0.702
AGB40567.1
PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD.
       0.683
AGB41035.1
PFAM: Late competence development protein ComFB.
  
     0.642
AGB40649.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.632
AGB40566.1
PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC.
       0.598
AGB41575.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.596
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.