STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB40762.1Uncharacterized protein containing SIS (sugar ISomerase) phosphosugar binding domain; PFAM: SIS domain; Belongs to the UPF0309 family. (242 aa)    
Predicted Functional Partners:
AGB40759.1
Phosphotransferase system, galactitol-specific IIB component; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
    0.845
AGB40761.1
Uncharacterized protein, putative amidase; PFAM: Creatinine amidohydrolase.
 
     0.841
AGB40757.1
Putative metal-dependent hydrolase with the TIM-barrel fold; PFAM: Phosphotriesterase family.
 
     0.817
AGB40760.1
Hypothetical protein; PFAM: PTS system sugar-specific permease component.
 
     0.787
AGB40764.1
PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase.
 
     0.734
AGB40758.1
PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
     0.710
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.707
AGB42029.1
Phosphotransferase system, galactitol-specific IIB component; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
    0.558
AGB40765.1
Hypothetical protein; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain.
       0.459
AGB40453.1
Transcriptional antiterminator; PFAM: Mga helix-turn-helix domain; HTH domain; PRD domain; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
     0.432
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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