STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB41131.1Putative homoserine kinase type II (protein kinase fold); PFAM: Phosphotransferase enzyme family. (341 aa)    
Predicted Functional Partners:
AGB41130.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2064).
     0.975
AGB41129.1
PFAM: Glycosyl transferase family 2.
 
     0.888
AGB41127.1
ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; non-canonical start codon.
 
     0.885
AGB41125.1
ABC-type uncharacterized transport system, periplasmic component.
 
     0.883
AGB41126.1
ABC-type spermidine/putrescine transport system, permease component I; PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.882
AGB41124.1
PFAM: SNARE associated Golgi protein.
 
     0.845
AGB41116.1
PFAM: Inosine-uridine preferring nucleoside hydrolase.
  
     0.761
AGB42031.1
Hypothetical protein; Manually curated; non-canonical start codon.
  
     0.722
AGB41128.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
     0.673
AGB41123.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Cysteine-rich domain.
 
     0.645
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.