STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB41441.1Bacterioferritin (cytochrome b1); PFAM: Ferritin-like domain; Belongs to the Dps family. (157 aa)    
Predicted Functional Partners:
AGB40910.1
NAD(P)H-nitrite reductase; PFAM: BFD-like [2Fe-2S] binding domain.
 
 
 0.910
AGB41443.1
Ferredoxin-like protein.
 
     0.743
AGB41442.1
Flavin-dependent dehydrogenase; PFAM: Glucose inhibited division protein A.
 
   
 0.728
AGB42471.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B.
  
     0.719
AGB41440.1
K+ transport system, NAD-binding component; PFAM: TrkA-N domain; Ion channel.
       0.701
AGB42359.1
Hypothetical protein.
  
     0.680
AGB40461.1
Hypothetical protein.
   
  
 0.574
AGB41575.1
Putative glycosyltransferase; PFAM: PilZ domain.
  
     0.549
AGB40530.1
PFAM: StbA protein.
  
  
 0.548
AGB41439.1
Putative ATP-dependent protease; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease.
       0.528
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.