STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB41575.1Putative glycosyltransferase; PFAM: PilZ domain. (212 aa)    
Predicted Functional Partners:
AGB41035.1
PFAM: Late competence development protein ComFB.
  
     0.705
AGB42151.1
Flagellar biosynthesis/type III secretory pathway chaperone; PFAM: FlgN protein.
 
  
 0.640
AGB40640.1
Flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN.
 
  
 0.622
AGB42140.1
PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.
  
  
 0.600
AGB42372.1
Hypothetical protein.
  
     0.598
AGB40572.1
Hypothetical protein; PFAM: CoA enzyme activase uncharacterised domain (DUF2229).
  
     0.596
AGB41074.1
PFAM: Protein of unknown function (DUF3006).
  
     0.591
AGB40637.1
Flagellar motor protein; PFAM: OmpA family.
  
 
 0.583
AGB42143.1
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.581
AGB40636.1
Flagellar motor component; PFAM: MotA/TolQ/ExbB proton channel family.
  
   0.561
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.