STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB41629.1PFAM: NADPH-dependent FMN reductase. (184 aa)    
Predicted Functional Partners:
AGB41630.1
Transcriptional regulator; PFAM: MarR family.
  
  
 0.703
AGB41628.1
Alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; Belongs to the phosphoglycerate mutase family.
       0.677
AGB40340.1
Uncharacterized Fe-S center protein; PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362).
 
     0.477
AGB42181.1
PFAM: Rubrerythrin.
 
     0.469
AGB41631.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
       0.467
AGB40338.1
PFAM: Nitroreductase family.
 
  
 0.427
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.