STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB41915.1DRTGG domain-containing protein; PFAM: DRTGG domain. (122 aa)    
Predicted Functional Partners:
AGB41914.1
Anti-sigma regulatory factor (Ser/Thr protein kinase); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 0.994
AGB41912.1
DRTGG domain-containing protein; PFAM: DRTGG domain.
 
  
 0.923
AGB41913.1
PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain.
 
   
 0.919
AGB41911.1
Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
 
     0.911
AGB42162.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.840
AGB42161.1
Ferredoxin.
 
   
 0.835
AGB41916.1
PFAM: Sporulation related domain.
       0.604
AGB40057.1
PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit.
 
     0.485
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
       0.400
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.