STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB42010.1Transcriptional regulator/sugar kinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase). (323 aa)    
Predicted Functional Partners:
AGB41398.1
PTS system, glucose-like IIB component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component.
  
 0.994
AGB41401.1
PTS system, glucose-specific IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-specific IIBC component.
  
 0.994
pgi
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
 
 
 0.951
AGB40802.1
PTS system, sucrose-specific IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, sucrose-specific IIBC component; PTS system, glucose-like IIB component.
  
 
 0.945
AGB42094.1
PTS system, trehalose-specific IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, trehalose-specific IIBC component; PTS system, glucose-like IIB component.
  
 
 0.945
AGB40129.1
Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
 
 
 0.938
AGB41265.1
Galactose mutarotase-like enzyme; Converts alpha-aldose to the beta-anomer.
 
 
 0.926
AGB41672.1
Galactose mutarotase-like enzyme; Converts alpha-aldose to the beta-anomer.
 
 
 0.925
AGB40056.1
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; PFAM: Glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.918
AGB41400.1
PTS system, glucose subfamily, IIA component; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component.
  
 
 0.915
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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