STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB42092.1Trehalose operon repressor; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: trehalose operon repressor, B. subtilis-type. (237 aa)    
Predicted Functional Partners:
AGB42094.1
PTS system, trehalose-specific IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, trehalose-specific IIBC component; PTS system, glucose-like IIB component.
 
  
 0.900
AGB40802.1
PTS system, sucrose-specific IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, sucrose-specific IIBC component; PTS system, glucose-like IIB component.
 
  
 0.788
AGB42093.1
Alpha,alpha-phosphotrehalase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase.
 
  
 0.746
AGB40803.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
    0.575
AGB42091.1
Hypothetical protein.
       0.520
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.