STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB42134.1Sulfotransferase family protein; PFAM: Sulfotransferase domain. (299 aa)    
Predicted Functional Partners:
AGB42133.1
Hypothetical protein; PFAM: Methyltransferase domain.
       0.718
AGB42131.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
     0.704
AGB42135.1
Hypothetical protein.
       0.701
AGB42130.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.689
AGB42132.1
Carbamoylphosphate synthase large subunit; PFAM: ATP-grasp domain.
       0.660
AGB42129.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
  
 0.648
AGB42125.1
PFAM: Glycosyl transferase family 2.
  
  
 0.615
AGB42136.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.598
AGB41690.1
ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
  
     0.510
cysC
Adenylylsulfate kinase ApsK; Catalyzes the synthesis of activated sulfate.
 
     0.508
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.