Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB42142.1PFAM: Protein of unknown function DUF115. (633 aa)    
Predicted Functional Partners:
AGB42138.1
PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.853
AGB42118.1
PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; N-acetylneuraminate synthase.
 
   
 0.805
AGB42140.1
PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS.
       0.790
AGB42141.1
Hypothetical protein.
       0.773
AGB42139.1
PFAM: FlgN protein.
       0.732
AGB42259.1
Hypothetical protein.
  
  
 0.724
AGB42143.1
Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.674
AGB42116.1
PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG.
 
   
 0.650
AGB42144.1
Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.607
AGB42117.1
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase; PFAM: Cytidylyltransferase.
 
     0.593
Your Current Organism:
Halobacteroides halobius
NCBI taxonomy Id: 748449
Other names: H. halobius DSM 5150, Halobacteroides halobius ATCC 35273, Halobacteroides halobius DSM 5150, Halobacteroides halobius MD-1, Halobacteroides halobius str. DSM 5150, Halobacteroides halobius strain DSM 5150
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