STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR50983.1Hypothetical protein. (669 aa)    
Predicted Functional Partners:
SFR53228.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.998
SFR58902.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.996
SFR53221.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.983
SFR52550.1
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
 
 0.981
SFR56903.1
PAS domain S-box-containing protein.
  
 0.981
SFR56925.1
Signal transduction histidine kinase.
  
 0.977
SFR55986.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.935
SFR52545.1
PAS domain S-box-containing protein.
  
 0.917
SFR59109.1
Two-component system, chemotaxis family, sensor kinase CheA.
   
 0.869
SFR59929.1
CheA signal transduction histidine kinase.
   
 0.869
Your Current Organism:
Thiomicrospira sp. ALE5
NCBI taxonomy Id: 748650
Other names: T. sp. ALE5, Thioalkalimicrobium sp. ALE5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.