STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381945_02214Unannotated protein. (366 aa)    
Predicted Functional Partners:
GCA_000381945_02211
Unannotated protein.
 
 0.999
GCA_000381945_02212
Unannotated protein.
 
 0.999
GCA_000381945_01646
Unannotated protein.
 
 
 0.932
GCA_000381945_01378
Unannotated protein.
   
 0.923
GCA_000381945_02210
Unannotated protein.
  
 
 0.920
GCA_000381945_02213
Unannotated protein.
 
  
 0.898
GCA_000381945_00536
Unannotated protein.
  
  
 0.877
GCA_000381945_02462
Unannotated protein.
 
  
 0.874
GCA_000381945_00093
Unannotated protein.
  
  
 0.835
GCA_000381945_02042
Unannotated protein.
  
 0.814
Your Current Organism:
Thioalkalivibrio sp. ALSr1
NCBI taxonomy Id: 748658
Other names: T. sp. ALSr1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.