STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381945_02678Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_000381945_02523
Unannotated protein.
  
     0.739
GCA_000381945_02778
Unannotated protein.
  
     0.729
GCA_000381945_01839
Unannotated protein.
  
     0.724
GCA_000381945_02495
Unannotated protein.
  
     0.709
GCA_000381945_01813
Unannotated protein.
  
     0.693
GCA_000381945_00257
Unannotated protein.
  
     0.690
GCA_000381945_02682
Unannotated protein.
  
     0.651
GCA_000381945_02686
Unannotated protein.
  
     0.607
GCA_000381945_02496
Unannotated protein.
  
     0.577
GCA_000381945_02696
Unannotated protein.
  
     0.577
Your Current Organism:
Thioalkalivibrio sp. ALSr1
NCBI taxonomy Id: 748658
Other names: T. sp. ALSr1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.