STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK13586.1Predicted ABC transporter, ATPase component. (241 aa)    
Predicted Functional Partners:
ADK13585.1
Putative membrane protein.
 
 
 0.961
ADK13584.1
Predicted sensory transduction histidine kinase.
 
     0.824
ADK13583.1
Predicted transcriptional regulator.
       0.790
ADK13582.1
Predicted cell wall binding protein.
 
     0.666
ADK14898.1
Predicted ABC transporter, permease component.
 
 
 0.597
ADK15028.1
Putative ABC transporter related membrane protein.
 
 
 0.594
ADK15764.1
Predicted membrane protein.
 
 
 0.581
ADK13587.1
Conserved hypothetical protein.
       0.567
ADK13672.1
Predicted cell wall binding protein.
  
     0.490
ADK15627.1
Putative membrane protein.
  
 
 0.490
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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