Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADK14974.1Uroporphyrinogen decarboxylase related protein; Belongs to the uroporphyrinogen decarboxylase family. (343 aa)    
Predicted Functional Partners:
ADK14975.1
Predicted ferredoxin-containing protein.
 
    0.932
ADK14973.1
Predicted cobalamin B12-binding protein.
 
    0.912
hemE
Uroporphyrinogen decarboxylase (URU-D); Belongs to the uroporphyrinogen decarboxylase family.
 
   
0.754
ADK15178.1
Conserved hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.709
ADK15120.1
Putative Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.706
ADK15557.1
Putative Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.703
ADK16514.1
Predicted Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.693
ADK14970.1
Putative cobalamin synthesis protein CobW.
 
    0.692
ADK15811.1
Predicted Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.681
ADK15555.1
Putative Uroporphyrinogen-III decarboxylase-like protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.679
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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