Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADK14975.1Predicted ferredoxin-containing protein. (597 aa)    
Predicted Functional Partners:
ADK14974.1
Uroporphyrinogen decarboxylase related protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.932
hemE
Uroporphyrinogen decarboxylase (URU-D); Belongs to the uroporphyrinogen decarboxylase family.
 
    0.900
ADK14973.1
Predicted cobalamin B12-binding protein.
 
    0.899
ADK14971.1
Uroporphyrinogen decarboxylase related protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.833
ADK15171.1
Predicted uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
  
 0.755
ADK16784.1
CO dehydrogenase/acetyl-CoA synthase, delta subunit.
 
 
 
 0.755
ADK16783.1
CO dehydrogenase/acetyl-CoA synthase gamma subunit; Corrinoid Fe-S protein.
 
 
 
 0.753
ADK16078.1
Uroporphyrinogen decarboxylase related protein; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.732
ADK15167.1
Putative Uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.728
ADK15166.1
Predicted methyltransferase MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.
 
    0.699
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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