Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADK15007.1Predicted two-component response regulator. (233 aa)    
Predicted Functional Partners:
phoR
Predicted phosphate regulon sensor protein.
 
 0.968
ADK15008.1
Predicted signal transduction histidine kinase.
 
 
 0.958
phoB
Predicted transcriptional regulator.
  
  
 
0.909
ADK16053.1
Putative sensor histidine kinase/response regulator hybrid.
  
 
 0.795
ADK17256.1
Putative membrane protein.
  
 
 0.793
ADK15762.1
Predicted two component sensor kinase.
 
 
 0.790
ADK13726.1
Predicted two component sensor kinase.
  
   0.789
ADK14562.1
Predicted sensory transduction histidine kinase.
 
 
 0.784
ADK15025.1
Predicted signal transduction histidine kinase.
  
   0.783
ADK15969.1
Predicted transcriptional regulator.
 
  
 0.775
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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