Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADK15010.1Putative flavin reductase-like protein with rubredoxin domain. (229 aa)    
Predicted Functional Partners:
ADK15254.1
Putative flavoprotein.
  
 0.967
ADK14764.1
Predicted rubrerythrin.
  
 0.854
ADK13977.1
Anaerobic-type carbon monoxide dehydrogenase, FAD/NAD-dependent oxidoreductase subunit.
  
 
 0.847
ADK15429.1
Predicted nitrate reductase NADH oxidase subunit.
  
 
 0.847
ftn
Ferritin; Iron-storage protein.
  
  
 0.843
hyaA
Hydrogenase-1 small chain precursor.
  
 
 0.741
ADK15653.1
Predicted rubrerythrin.
  
 0.690
ADK15997.1
Predicted FAD-dependent pyridine nucleotide-disulfide oxidoreductase (class I); Belongs to the sulfur carrier protein TusA family.
  
  
 0.642
ADK14002.1
Pyruvate:ferredoxin oxidoreductase.
     
 0.631
ADK15982.1
Pyruvate:ferredoxin oxidoreductase.
     
 0.631
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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