STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK15696.1Predicted transcriptional regulator. (156 aa)    
Predicted Functional Partners:
ADK15695.1
Predicted acyl-CoA thioesterase 1.
 
     0.817
ADK16279.1
Conserved hypothetical protein.
 
     0.675
ADK14583.1
Conserved hypothetical protein.
  
     0.607
ADK15997.1
Predicted FAD-dependent pyridine nucleotide-disulfide oxidoreductase (class I); Belongs to the sulfur carrier protein TusA family.
 
  
 0.588
ADK15047.1
Predicted glyoxalase.
 
   
 0.578
ADK16549.1
Putative acetyltransferase.
  
     0.571
ADK17033.1
Predicted transcriptional regulator; Duplicated domains.
  
     0.556
ADK13904.1
Hypothetical protein.
  
   
 0.534
ADK16273.1
Putative general stress protein 26 related protein.
  
     0.516
ADK15803.1
Conserved hypothetical protein.
  
     0.499
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.