STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45316.1KEGG: sun:SUN_0033 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87. (782 aa)    
Predicted Functional Partners:
ADV45317.1
Hypothetical protein; InterPro IPR012902; KEGG: sun:SUN_0032 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.697
ADV45318.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593; KEGG: sun:SUN_0031 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein.
       0.697
ADV45319.1
General secretion pathway protein D; COGs: COG1450 Type II secretory pathway component PulD; InterProIPR013356: IPR004845: IPR005644: IPR004846: IPR 001775; KEGG: sun:SUN_0030 type II secretion system protein D; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: Type II secretion system protein D; TIGRFAM: general secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D.
       0.697
ADV45320.1
PDZ/DHR/GLGF domain protein; COGs: COG3031 Type II secretory pathway component PulC; InterPro IPR001478; KEGG: sun:SUN_0029 hypothetical protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; PFAM: PDZ domain (Also known as DHR or GLGF); TIGRFAM: general secretion pathway protein C.
       0.697
ADV45321.1
KEGG: sun:SUN_0028 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
ADV45322.1
KEGG: sun:SUN_0027 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
ADV45323.1
KEGG: sun:SUN_0026 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
ADV45324.1
KEGG: sun:SUN_0025 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.697
rpmI
LSU ribosomal protein L35P; InterPro IPR001706: IPR018265: IPR021137; KEGG: sun:SUN_0041 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.535
ADV45325.1
General secretion pathway protein G; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902: IPR010054: IPR013545: IPR000983; KEGG: sun:SUN_0024 type II secretion system protein G; PFAM: type II secretion system protein G; SPTR: Type II secretion system protein G; TIGRFAM: general secretion pathway protein G; PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain.
       0.451
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.