STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45620.1KEGG: sun:SUN_1302 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: RHS repeat-associated core domain. (226 aa)    
Predicted Functional Partners:
ADV45621.1
Hypothetical protein; KEGG: tva:TVAG_071330 Beige/BEACH domain containing protein; SPTR: Putative uncharacterized protein.
       0.773
ADV45622.1
YD repeat protein; InterPro IPR006530; KEGG: sun:SUN_1302 hypothetical protein; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: YD repeat protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
 
    
0.668
ADV46036.1
Protein of unknown function DUF2339, transmembrane; COGs: COG5373 membrane protein; InterPro IPR019286; KEGG: sun:SUN_1163 hypothetical protein; PFAM: Protein of unknown function DUF2339, transmembrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2339).
  
     0.502
ADV45623.1
COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660: IPR006504; KEGG: nis:NIS_1048 hypothetical protein; PFAM: arsenate reductase and related; SPTR: Putative uncharacterized protein; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family.
       0.480
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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