STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45780.1TonB family protein; InterPro IPR006260; KEGG: sun:SUN_2181 periplasmic protein TonB; PFAM: TonB domain; SPTR: Periplasmic protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain. (298 aa)    
Predicted Functional Partners:
ADV45779.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: nis:NIS_1423 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2.
  
 
 0.931
ADV45778.1
Outer membrane transport energization protein ExbB; COGs: COG0811 Biopolymer transport protein; InterPro IPR014172: IPR002898; KEGG: tdn:Suden_0278 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; TC 2.C.1.1.1.
  
 
 0.891
ADV45777.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: sun:SUN_2187 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.773
ADV47128.1
TonB-dependent receptor plug; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: sun:SUN_1589 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
   
 
 0.752
ADV46407.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: sun:SUN_1618 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2.
  
 
 0.709
ADV45720.1
Cell division and transport-associated protein TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: sun:SUN_1768 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.2.1.
  
 
 0.706
ADV45542.1
Hypothetical protein; InterPro IPR011031; KEGG: tdn:Suden_0999 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Class III cytochrome C family.
  
     0.605
ADV45783.1
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: sun:SUN_2180 TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent copper receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
 
 0.538
ADV46406.1
Outer membrane transport energization protein ExbB; COGs: COG0811 Biopolymer transport protein; InterPro IPR014172: IPR002898; KEGG: sun:SUN_1617 biopolymer ExbB/TolQ family transporter; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; TC 2.C.1.1.1.
  
 
 0.538
ADV45719.1
Cell division and transport-associated protein TolQ; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: sun:SUN_1769 biopolymer ExbB/TolQ family transporter; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.2.1.
  
 
 0.533
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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