STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45783.1TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: sun:SUN_2180 TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent copper receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (667 aa)    
Predicted Functional Partners:
ADV46126.1
Membrane protein involved in aromatic hydrocarbon degradation; COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: sun:SUN_1508 hypothetical protein; PFAM: membrane protein involved in aromatic hydrocarbon degradation; SPTR: Putative uncharacterized protein; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
   
 0.610
ADV47106.1
COGs: COG2857 Cytochrome c1; InterPro IPR013838: IPR009056: IPR021195: IPR003088; KEGG: sun:SUN_0210 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: cytochrome c class I; SPTR: Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: Cytochrome c; Cytochrome C1 family.
  
     0.555
ADV47320.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR001327: IPR013027; KEGG: nis:NIS_0146 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Sulfide-quinone reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.541
ADV45780.1
TonB family protein; InterPro IPR006260; KEGG: sun:SUN_2181 periplasmic protein TonB; PFAM: TonB domain; SPTR: Periplasmic protein TonB; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 
 0.538
ADV46861.1
KEGG: nis:NIS_1791 heme d1 biosynthesis protein NirF; SPTR: Heme d1 biosynthesis protein NirF; PFAM: Cytochrome D1 heme domain.
  
 
 
 0.499
ADV45785.1
COGs: COG4314 lipoprotein involved in nitrous oxide reduction; KEGG: abu:Abu_0738 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NosL.
 
     0.495
ADV45710.1
COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: sun:SUN_1778 chromosome partitioning protein, ATPase ParA; SPTR: Chromosome partitioning protein, ATPase ParA; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
    
 
 0.489
ADV45784.1
KEGG: tdn:Suden_1552 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NosL.
       0.481
ADV45639.1
Hypothetical protein; COGs: COG2143 Thioredoxin-related protein; InterPro IPR009056: IPR017936; KEGG: abu:Abu_0573 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255.
  
     0.472
ADV45752.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.450
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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