STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45847.1ErfK/YbiS/YcfS/YnhG family protein; COGs: COG1376 conserved hypothetical protein; InterPro IPR005490; KEGG: xau:Xaut_1444 ErfK/YbiS/YcfS/YnhG family protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain. (235 aa)    
Predicted Functional Partners:
ADV46215.1
ErfK/YbiS/YcfS/YnhG family protein; COGs: COG1376 conserved hypothetical protein; InterPro IPR005490; KEGG: sun:SUN_1592 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain.
  
     0.767
ADV45365.1
ErfK/YbiS/YcfS/YnhG family protein; InterPro IPR005490; KEGG: sun:SUN_1885 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain.
  
     0.743
ADV46928.1
Porin; COGs: COG3637 Opacity protein and related surface antigens; KEGG: oan:Oant_0133 porin; SPTR: Porin; PFAM: OmpA-like transmembrane domain.
  
     0.738
ADV47011.1
Hypothetical protein; InterPro IPR013423; KEGG: hoh:Hoch_2166 peptidoglycan-binding lysin domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR02594.
  
     0.610
ADV45731.1
ErfK/YbiS/YcfS/YnhG family protein; InterPro IPR005490; KEGG: sun:SUN_1349 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; SPTR: Putative uncharacterized protein; PFAM: L,D-transpeptidase catalytic domain.
  
     0.585
ADV45848.1
Heat shock protein Hsp20; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: sun:SUN_1467 hypothetical protein; PFAM: heat shock protein Hsp20; SPTR: Putative uncharacterized protein; PFAM: Hsp20/alpha crystallin family.
       0.533
ADV47252.1
D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: sun:SUN_0399 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alan [...]
     
 0.516
ADV46467.1
Protein of unknown function DUF330; COGs: COG3218 ABC-type uncharacterized transport system auxiliary component; InterPro IPR005586; KEGG: sun:SUN_1356 hypothetical protein; PFAM: protein of unknown function DUF330; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF330).
  
     0.512
ADV46206.1
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790: IPR005311: IPR001460; KEGG: sun:SUN_1220 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
     
 0.504
ADV46070.1
COGs: COG3719 Ribonuclease I; InterPro IPR018188: IPR001568; KEGG: sun:SUN_0981 hypothetical protein; PFAM: ribonuclease T2; SPTR: Putative uncharacterized protein; PFAM: Ribonuclease T2 family; Belongs to the RNase T2 family.
  
     0.477
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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