STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV45980.1KEGG: sun:SUN_1678 hypothetical protein; SPTR: Putative uncharacterized protein. (507 aa)    
Predicted Functional Partners:
ADV45983.1
Pilus (MSHA type) biogenesis protein MshL; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775: IPR013358: IPR004846; KEGG: sun:SUN_1675 general secretory pathway protein D; PFAM: type II and III secretion system protein; SPTR: General secretory pathway protein D; TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: Secretin N-terminal domain; Bacterial type II and III secretion system protein; TIGRFAM: pilus (MSHA type) biogenesis protein MshL.
  
  
 0.827
ADV45984.1
AAA ATPase; InterPro IPR003593; KEGG: sun:SUN_1674 hypothetical protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA).
  
    0.803
ADV45985.1
KEGG: sun:SUN_1673 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.801
ADV45981.1
KEGG: sun:SUN_1677 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Pilus assembly protein, PilO.
       0.800
ADV45982.1
KEGG: sun:SUN_1676 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV45986.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831; KEGG: sun:SUN_1672 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: General secretory pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
   
 
 0.773
ADV45987.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: sun:SUN_1671 general secretory pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretory pathway protein F; PFAM: Bacterial type II secretion system protein F domain.
   
 
 0.773
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.583
glyS
COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR002311: IPR015944: IPR006194; KEGG: sun:SUN_1701 glycyl-tRNA synthetase subunit beta; PFAM: glycyl-tRNA synthetase beta subunit; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit.
       0.565
ADV45318.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593; KEGG: sun:SUN_0031 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein.
   
 
 0.410
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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