STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmBtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (391 aa)    
Predicted Functional Partners:
ADV46114.1
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
  
 0.805
ADV46117.1
ABC transporter related protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593: IPR003439: IPR017871; KEGG: sun:SUN_1750 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cell division ATP-binding protein FtsE; PFAM: ABC transporter.
      0.802
ADV46118.1
InterPro IPR013055; KEGG: sun:SUN_1749 cell division protein FtsX; SPTR: Cell division protein FtsX.
       0.800
ADV46119.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: sun:SUN_1748 M24/M37 family peptidase; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family; PFAM: Peptidase family M23.
       0.800
ADV46115.1
COGs: COG3401 Fibronectin type 3 domain-containing protein; InterPro IPR003961; KEGG: sun:SUN_1752 hypothetical protein; PFAM: Fibronectin type III domain protein; SPTR: Putative uncharacterized protein.
       0.772
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.749
ADV46499.1
KEGG: sun:SUN_1182 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; TIGRFAM: conserved hypothetical protein TIGR00288.
  
  
 0.634
truD
tRNA pseudouridine synthase D TruD; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
 
 
 0.616
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
 
 0.600
truD-2
tRNA pseudouridine synthase D TruD; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
 
 
 0.575
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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