STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46175.1KEGG: sun:SUN_1597 hypothetical protein; SPTR: Putative uncharacterized protein. (126 aa)    
Predicted Functional Partners:
ADV46174.1
TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148; KEGG: sun:SUN_1598 potassium uptake protein; PFAM: TrkA-N domain protein; SPTR: Potassium uptake protein; PFAM: TrkA-N domain.
 
     0.951
ADV46176.1
TM1410 hypothetical-related protein; COGs: COG3868 conserved hypothetical protein; InterPro IPR004352; KEGG: mmw:Mmwyl1_0681 endo alpha-1,4 polygalactosaminidase precusor; PFAM: TM1410 hypothetical-related protein; SPTR: Putative endo alpha-1,4 polygalactosaminidase precusor; PFAM: TM1410 hypothetical-related protein.
       0.540
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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