STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46405.1KEGG: sun:SUN_1635 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Archaea bacterial proteins of unknown function. (307 aa)    
Predicted Functional Partners:
ADV46406.1
Outer membrane transport energization protein ExbB; COGs: COG0811 Biopolymer transport protein; InterPro IPR014172: IPR002898; KEGG: sun:SUN_1617 biopolymer ExbB/TolQ family transporter; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB, group 2; TC 2.C.1.1.1.
       0.562
ADV46407.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: sun:SUN_1618 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2.
       0.562
ADV46408.1
Radical SAM domain protein; COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197; KEGG: sun:SUN_1607 MoaA/NifB/PqqE family protein; PFAM: Radical SAM domain protein; SPTR: MoaA/NifB/PqqE family protein; PFAM: Radical SAM superfamily.
       0.541
ADV45855.1
DNA mismatch repair protein MutS domain protein; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR007696: IPR000432: IPR007695; KEGG: sdl:Sdel_0624 DNA mismatch repair protein MutS domain protein; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein MutS domain protein; PFAM: HNH endonuclease; MutS domain V; MutS domain I; MutS domain III.
  
     0.514
ADV46717.1
NnrS family protein; COGs: COG3213 Uncharacterized protein involved in response to NO; InterPro IPR010266; KEGG: nis:NIS_0124 hypothetical protein; PFAM: NnrS family protein; SPTR: Putative uncharacterized protein; PFAM: NnrS protein.
  
     0.488
ADV47106.1
COGs: COG2857 Cytochrome c1; InterPro IPR013838: IPR009056: IPR021195: IPR003088; KEGG: sun:SUN_0210 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: cytochrome c class I; SPTR: Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: Cytochrome c; Cytochrome C1 family.
  
     0.462
ADV46184.1
COGs: COG2378 transcriptional regulator protein; KEGG: sun:SUN_2302 transcriptional regulator; SPTR: Transcriptional regulator.
  
     0.434
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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