STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46454.1KEGG: phu:Phum_PHUM210990 hypothetical protein; SPTR: Gp1. (70 aa)    
Predicted Functional Partners:
ADV46455.1
Hypothetical protein; InterPro IPR000633; KEGG: syf:Synpcc7942_0722 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV46456.1
KEGG: vvi:100251363 hypothetical protein LOC100251363.
       0.773
ADV46457.1
Hypothetical protein; KEGG: cbr:CBG16921 C. briggsae CBR-PPK-3 protein; SPTR: Protein VF11C1L.1, partially confirmed by transcript evidence.
       0.773
ADV46459.1
Hypothetical protein; InterPro IPR010916; KEGG: sro:Sros_5701 ABC-type dipeptide transport system periplasmic component-like protein; SPTR: Fibronectin type III domain protein.
       0.517
ADV46453.1
KEGG: ppr:PBPRB1440 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.510
ADV46460.1
KEGG: fjo:Fjoh_3539 hypothetical protein; SPTR: Bacteroides conjugative transposon TraM-like protein.
       0.501
ADV46461.1
KEGG: tdn:Suden_0801 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.501
ADV46462.1
Integrase family protein; InterPro IPR002104; KEGG: nis:NIS_0440 phage integrase family site specific recombinase; PFAM: integrase family protein; SPTR: Site-specific recombinase, phage integrase family; PFAM: Domain of unknown function (DUF3596); Phage integrase family; Belongs to the 'phage' integrase family.
       0.404
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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