STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46769.1COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: sun:SUN_1310 hypothetical protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Putative uncharacterized protein; PFAM: NifU-like domain. (95 aa)    
Predicted Functional Partners:
ADV46768.1
COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: sun:SUN_1049 transformation system protein; PFAM: phosphoribosyltransferase; SPTR: Transformation system protein; PFAM: Phosphoribosyl transferase domain.
       0.585
ilvD
COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404: IPR020558: IPR000581; KEGG: sun:SUN_2427 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.570
ADV45281.1
COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192: IPR016454; KEGG: sun:SUN_0007 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V.
  
 
 0.557
ADV45768.1
4Fe-4S ferredoxin; InterPro IPR017896: IPR017900; KEGG: sun:SUN_2176 4Fe-4S ferredoxin; SPTR: 4Fe-4S ferredoxin; PFAM: 4Fe-4S binding domain; TIGRFAM: MauM/NapG family ferredoxin-type protein.
  
  
 0.557
ADV45510.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR004489: IPR006058: IPR017900: IPR001041: IPR 017896; KEGG: sun:SUN_0151 succinate dehydrogenase/fumarate reductase, iron-sulfur protein; PFAM: ferredoxin; SPTR: Succinate dehydrogenase/fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.539
ADV46327.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR004489: IPR001041: IPR017896: IPR006058: IPR 017900; KEGG: sun:SUN_1201 succinate dehydrogenase/fumarate reductase, iron-sulfur protein; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase/fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.539
ADV46563.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR006058: IPR004489: IPR001041: IPR017896; KEGG: abu:Abu_0299 fumarate reductase iron-sulfur subunit; SPTR: Fumarate reductase, iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.539
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
    0.483
ADV45570.1
4Fe-4S ferredoxin; InterPro IPR017900: IPR017896; KEGG: nis:NIS_0394 4Fe-4S ferredoxin; SPTR: 4Fe-4S ferredoxin.
   
    0.483
ADV47155.1
4Fe-4S ferredoxin; InterPro IPR017900: IPR017896; KEGG: sun:SUN_1984 4Fe-4S ferredoxin; SPTR: 4Fe-4S ferredoxin.
   
    0.483
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.