STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46839.1Protein of unknown function DUF937; COGs: COG3753 conserved hypothetical protein; InterPro IPR009282; KEGG: cpb:Cphamn1_2217 protein of unknown function DUF937; PFAM: protein of unknown function DUF937; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF937). (150 aa)    
Predicted Functional Partners:
ADV46838.1
Protein of unknown function DUF523; COGs: COG1683 conserved hypothetical protein; InterPro IPR007553; KEGG: sun:SUN_0310 hypothetical protein; PFAM: protein of unknown function DUF523; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF523).
       0.773
ADV46278.1
KEGG: mrd:Mrad2831_0933 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF3597).
  
     0.718
ADV46840.1
Transposase IS200-family protein; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: nha:Nham_4597 transposase IS200-like; PFAM: transposase IS200-family protein; SPTR: Transposase IS200-like; manually curated; PFAM: Transposase IS200 like.
       0.503
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.