STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46862.1Hypothetical protein; InterPro IPR009056; KEGG: nis:NIS_1793 cytochrome c, class I; SPTR: Cytochrome c, class I; PFAM: Cytochrome c. (107 aa)    
Predicted Functional Partners:
ADV46729.1
COGs: COG2863 Cytochrome c553; InterPro IPR003088: IPR008168: IPR009056; KEGG: sun:SUN_0685 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: Cytochrome c, class I; PFAM: Cytochrome c.
     
  0.900
ADV46860.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR006638: IPR017200: IPR007197; KEGG: nis:NIS_1792 heme d1 biosynthesis protein NirJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Heme d1 biosynthesis protein NirJ; PFAM: Radical SAM superfamily.
       0.778
ADV46861.1
KEGG: nis:NIS_1791 heme d1 biosynthesis protein NirF; SPTR: Heme d1 biosynthesis protein NirF; PFAM: Cytochrome D1 heme domain.
       0.778
ADV46859.1
uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878: IPR006366; KEGG: tdn:Suden_1989 uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase.
       0.540
ADV46863.1
Nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006066: IPR005117: IPR006067; KEGG: sun:SUN_0312 ferredoxin--nitrite reductase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; SPTR: Ferredoxin--nitrite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
       0.523
ADV45638.1
Sulfate thiol esterase SoxB; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006179: IPR006311: IPR008334; KEGG: ant:Arnit_1810 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase domain-containing protein; SPTR: 5'-Nucleotidase domain protein; PFAM: 5'-nucleotidase, C-terminal domain; Belongs to the 5'-nucleotidase family.
    
  0.500
ADV47181.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: sun:SUN_0179 cbb3-type cytochrome c oxidase subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome c oxidase, cbb3-type, subunit II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.428
ADV46864.1
COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: sun:SUN_1334 hypothetical protein; PFAM: Paraquat-inducible protein A; SPTR: Putative uncharacterized protein; PFAM: Paraquat-inducible protein A.
       0.407
ADV46865.1
COGs: COG2995 Uncharacterized paraquat-inducible protein A; InterPro IPR007498; KEGG: sun:SUN_1335 hypothetical protein; PFAM: Paraquat-inducible protein A; SPTR: Putative uncharacterized protein; PFAM: Paraquat-inducible protein A.
       0.407
ADV46866.1
Mammalian cell entry related domain protein; COGs: COG3008 Paraquat-inducible protein B; InterPro IPR003399; KEGG: sun:SUN_1336 hypothetical protein; PFAM: Mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein; PFAM: mce related protein.
       0.407
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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