STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46881.1Protein of unknown function DUF188; COGs: COG1671 conserved hypothetical protein; InterPro IPR003791; KEGG: nis:NIS_0137 hypothetical protein; PFAM: protein of unknown function DUF188; SPTR: UPF0178 protein NIS_0137; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; Belongs to the UPF0178 family. (149 aa)    
Predicted Functional Partners:
ADV46880.1
COGs: COG5316 conserved hypothetical protein; KEGG: gsu:GSU3318 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADV46879.1
Riboflavin kinase; COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865; KEGG: sun:SUN_0463 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin biosynthesis regulatory protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase.
       0.556
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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