STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46961.1Hypothetical protein; KEGG: bhy:BHWA1_01633 TPR domain-containing protein; SPTR: Polysaccharide deacetylase. (307 aa)    
Predicted Functional Partners:
ADV46958.1
Glycosyl transferase family 2; InterPro IPR001173; KEGG: dat:HRM2_25430 putative lipopolysaccharide N-acetyl-glycoaminyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative lipopolysaccharide N-acetyl-glycoaminyltransferase; PFAM: Glycosyl transferase family 2.
       0.773
ADV46959.1
COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: drt:Dret_0395 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.773
ADV46960.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: drt:Dret_0393 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
       0.773
ADV46962.1
COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR002376: IPR001555; KEGG: hoh:Hoch_2469 formyl transferase domain protein; PFAM: formyl transferase domain protein; SPTR: Formyl transferase domain protein; PFAM: Formyl transferase.
       0.773
ADV46963.1
AMP-dependent synthetase and ligase; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: fjo:Fjoh_1040 coenzyme F390 synthetase-like protein; PFAM: AMP-dependent synthetase and ligase; SPTR: Coenzyme F390 synthetase-like protein.
       0.773
ADV46964.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gfo:GFO_0584 glycosyl transferases group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; manually curated; PFAM: Glycosyl transferases group 1.
       0.773
ADV46965.1
Hexapeptide repeat-containing transferase; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); KEGG: shm:Shewmr7_1390 hexapaptide repeat-containing transferase; SPTR: Transferase hexapeptide repeat containing protein.
       0.773
ADV46966.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ttr:Tter_1843 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
       0.773
ADV46957.1
Putative transposase.
       0.645
ADV46967.1
O-antigen polymerase; InterPro IPR007016; KEGG: ckr:CKR_2803 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase.
       0.603
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.