STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV47039.1Terminase GpA; COGs: COG5525 Bacteriophage tail assembly protein; InterPro IPR008866; KEGG: syf:Synpcc7942_0731 putative phage terminase large subunit; PFAM: terminase GpA; SPTR: Putative phage terminase large subunit; manually curated; PFAM: Phage terminase large subunit (GpA). (613 aa)    
Predicted Functional Partners:
ADV47024.1
Hypothetical protein; COGs: COG4385 Bacteriophage P2-related tail formation protein; KEGG: stm:STM4201 putative phage tail protein; SPTR: Putative phage tail protein; PFAM: Phage tail protein (Tail_P2_I).
 
  
 0.963
ADV47025.1
Baseplate J family protein; COGs: COG3948 Phage-related baseplate assembly protein; InterPro IPR014507: IPR006949; KEGG: abu:Abu_1662 baseplate assembly protein J, putative; PFAM: Baseplate J family protein; SPTR: Baseplate assembly protein J, putative; PFAM: Baseplate J-like protein.
 
  
 0.952
ADV47036.1
Phage portal protein, lambda family; COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: dsy:DSY2183 hypothetical protein; PFAM: portal protein lambda; SPTR: Putative uncharacterized protein; TIGRFAM: phage portal protein, lambda family; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
  
 0.938
ADV47035.1
InterPro IPR006433; KEGG: bpy:Bphyt_1173 peptidase U35 phage prohead HK97; PFAM: peptidase U35 phage prohead HK97; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage major head subunit gpT; Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
  
 0.919
ADV47013.1
COGs: COG3500 Phage protein D; KEGG: abu:Abu_1651 phage tail protein D; SPTR: Phage tail protein D; PFAM: Phage late control gene D protein (GPD).
 
  
 0.904
ADV47019.1
COGs: COG3497 Phage tail sheath protein FI; KEGG: cjr:CJE0227 major tail sheath protein; SPTR: Cje0227.
 
  
 0.876
ADV47023.1
KEGG: pmx:PERMA_1822 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.826
ADV47027.1
KEGG: cjr:CJE0236 baseplate assembly protein V, putative; SPTR: Putative baseplate assembly protein V.
  
  
 0.816
ADV47026.1
Hypothetical protein; KEGG: cts:Ctha_0260 gpW/GP25 family protein; SPTR: Putative uncharacterized protein.
  
    0.812
ADV47038.1
KEGG: syg:sync_2494 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.