STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV47059.1Phage-type endonuclease; InterPro IPR019080: IPR017482; KEGG: cjr:CJE0556 hypothetical protein; PFAM: YqaJ viral recombinase family; SPTR: Putative uncharacterized protein; TIGRFAM: phage-type endonuclease; PFAM: YqaJ-like viral recombinase domain; TIGRFAM: putative phage-type endonuclease. (290 aa)    
Predicted Functional Partners:
ADV47058.1
ERF family protein; InterPro IPR007499; KEGG: sag:SAG0565 hypothetical protein; PFAM: ERF family protein; SPTR: Conserved domain protein; PFAM: ERF superfamily.
  
    0.820
ADV47061.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.780
ADV47062.1
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterPro IPR001091: IPR002941; KEGG: cbi:CLJ_B1379 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA (Cytosine-5-)-methyltransferase; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.775
ADV47057.1
Hypothetical protein; KEGG: apr:Apre_0398 chromosome segregation ATPase-like protein; SPTR: Acetyltransferase, GNAT family.
       0.773
ADV47060.1
KEGG: nis:NIS_0451 hypothetical protein; SPTR: Gp36.
       0.773
ADV47063.1
KEGG: tcu:Tcur_4655 hypothetical protein.
       0.757
ADV47071.1
Prophage CP4-57 regulatory; InterPro IPR010260; KEGG: rso:RSc1897 hypothetical protein; PFAM: Prophage CP4-57 regulatory; SPTR: Probable prophage regulatory transcription regulator protein; PFAM: Prophage CP4-57 regulatory protein (AlpA); TIGRFAM: DNA binding domain, excisionase family.
       0.584
ADV47068.1
COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525: IPR018117; KEGG: ebi:EbC_32190 C-5 cytosine-specific DNA methylase; PFAM: C-5 cytosine-specific DNA methylase; SPTR: Cytosine-specific methyltransferase; PFAM: C-5 cytosine-specific DNA methylase.
       0.562
ADV47064.1
Hypothetical protein.
       0.531
ADV47065.1
KEGG: rsh:Rsph17029_0651 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.531
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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