STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV47286.1InterPro IPR012902; KEGG: cha:CHAB381_1559 N-terminal methylation domain-containing protein; SPTR: Prepilin-type N-terminal cleavage/methylation domain protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain. (157 aa)    
Predicted Functional Partners:
ADV47287.1
GGDEF domain containing protein; InterPro IPR000160; KEGG: nam:NAMH_0819 sensory box/GGDEF domain protein; PFAM: GGDEF domain containing protein; SPTR: Diguanylate cyclase; PFAM: GGDEF domain.
       0.651
ADV45318.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593; KEGG: sun:SUN_0031 type II secretion system protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein.
  
 
 0.570
ADV45986.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831; KEGG: sun:SUN_1672 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: General secretory pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
  
 
 0.570
ADV45342.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992: IPR018076: IPR003004; KEGG: sun:SUN_0021 type II secretion system protein F; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein F; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.501
ADV45987.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: sun:SUN_1671 general secretory pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretory pathway protein F; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.501
ADV47285.1
Hypothetical protein; InterPro IPR012902; KEGG: sun:SUN_2149 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
      
0.496
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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